Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869782.1_cds_XP_016433855.1_29971
CDS Infomation

[gene=LOC107760336] [db_xref=GeneID:107760336] [protein=probable E3 ubiquitin-protein ligase HERC2] [protein_id=XP_016433855.1] [location=complement(join(89247..89440,89600..89755,89838..89966,91645..91839,92343..92482,93456..93988))] [gbkey=CDS]
Sequence

ATGCTATCATTCTATTACCACACTCGTCGTCGTACTCTTCCCACTTTTCTCCGGCGGCGT
CACCTTTCTTCTTCTTCTACTTCGTCCAAAGTTCCTCTTCTCTGGAAATCTGAAATCACT
GATTCTTCCGAATCAATCACCACCGTCCAATTATATTCCTGGGGCCGTGGTGCTTCCGGC
CAATTAGGTGGCGGTATTGAAGAAATACGAATTTACCCTTCTCCTGTTGCCTCATTTTCT
CTGCCTCCTACTTTCCGTTTATCTTCTCCTATTCCTGGTCGTCTTCCTTCATCTAATAAT
GTGGGAAATGCTGACGTGGAAATAGGAATTTCATGTGGGCTTTTTCATTCAGCTTTATTG
GTTGATGGGAATTTATGGATTTGGGGTAAAGGTGATGGAGGTCGTCTTGGTTTTGGTCAT
GAGAATCCAGTTTTTGTTCCTACTTTGAATACTAATTTGGGCTCGGTGAGAAGCGTTGCT
CTTGGGGGGCTTCATTCTGTTGCTCTTAACTCTCTTGGCCAGGTCTTCACTTGGGGTTAC
GGTGGCTTTGGTGCTCTTGGTCATACAGTTTATCATAGAGAGCTGGTTCCTAGATTAGTT
GAGGGCTCTTGGGATGCAGAAATATGCCACGTTGCAACCAGTGGGACACATACAGCTGCT
ATAACAAAGTCAGGTGAGCTTTATACTTGGGGCCGAGATGAAGGGGATGGTCGATTAGGC
CTTGGTCCAGGTCGAGGCCCAAATGAAGGAGGTGGTCTTAGCATCCCTTCAAAGGTAAAA
GCACTTCCTGTGAGCGCAGCTGCTGTTTCATGTGGTGGTTTTTTCACAATGGCACTATCT
GAAGAGGGAGAGCTTTGGAATTGGGGAGCCAACTCGAACTATGAGCTCGGAAGAGGTGAC
AAATTAGGTGGTTGGAAACCACAACCAGTTTCAAGCCTTAAAGGTGTTCGTGTTGTTCAG
ATAGCTAGTGGGGGATATCATTCTCTAGCTTTGACTGATAAGGGAGAAGTGCTTTCATGG
GGTCATGGAGGCCATGGTCAACTAGGTAATTCTTCTCTTCACAACCAGAAAGTGCCTATC
CCAGTTGAGACTTTGACCCACGAGAAAGTCATCTATATAGCTTGTGGAGGTTCATCATCG
GCAGCTATAACTGATGGTGGCAAGCTATACATGTGGGGCAATGCACAAGATTGTCAACTG
GGGGTTCCCGGACTGCCGGAGAAACAGTTATCTCCTATTGAAGTCAAGTTTCTCATGGAG
GACGATGGACTTGGGAACCATAACGTGCTTTCAGTAGCCATTGGGGCTTCTCATGCCATG
TGCCTGGTTTCCAGGTCAGGTCACTGA

Peptide Sequence

PEP ID

XP_016433855.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Nicotiana tabacum]
Sequence

MLSFYYHTRRRTLPTFLRRRHLSSSSTSSKVPLLWKSEITDSSESITTVQLYSWGRGASG
QLGGGIEEIRIYPSPVASFSLPPTFRLSSPIPGRLPSSNNVGNADVEIGISCGLFHSALL
VDGNLWIWGKGDGGRLGFGHENPVFVPTLNTNLGSVRSVALGGLHSVALNSLGQVFTWGY
GGFGALGHTVYHRELVPRLVEGSWDAEICHVATSGTHTAAITKSGELYTWGRDEGDGRLG
LGPGRGPNEGGGLSIPSKVKALPVSAAAVSCGGFFTMALSEEGELWNWGANSNYELGRGD
KLGGWKPQPVSSLKGVRVVQIASGGYHSLALTDKGEVLSWGHGGHGQLGNSSLHNQKVPI
PVETLTHEKVIYIACGGSSSAAITDGGKLYMWGNAQDCQLGVPGLPEKQLSPIEVKFLME
DDGLGNHNVLSVAIGASHAMCLVSRSGH

Transcript Sequence

Gene sequence data has not been registered.